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Cute X-Files Moments
Episode guide for seasons 5-6, complete with comments from the author. Lots and lots of comments.
Official site
Complete episode guide, character guide, everything guide.
Another X-Cellent X-Phile's page
The Unparelelled X-Files Page
Exactly what the name says. This is a wicked page.
The Gossamer Project
HUGE X-Files fanfiction archive.
Raven's X-Files Site
A slightly shippy page with some excellent original artwork.
The Psyco Files
Way kewl site with some great spoof lyrics, stories, and more.